-Genomic Data for Nkx1-1 Links
Protein
UniPROBE Accession Number
UP00220
Species
Mus musculus
Domain
Homeobox
Swiss-Prot
O08713
Name and Synonyms
Name: NK1 transcription factor related, locus 1 (Drosophila).
Synonyms:Nkx-1.1, Sax2
IHOP
124453
Description
None Available
NCBI Acc.
XP_992115
Nkx1-1 DNA binding domain
1   RRARTAFTYE QLVALENKFK ATRYLSVCER LNLALSLSLT ETQVKIWFQN
51  RRTKWKK
JASPAR
None Available
Downloads
There is no position weight matrix available for this entry. However, you can download the zip of all Nkx1-1 PBM files or view the downloads directory for individual files.
-Nkx1-1 Datasets
Gene Clone Type Last Modified Save View
Nkx1-1 search save
Nkx1-1 Insert Sequence
1    MDGRAELPIF PRAGVPPLAA SDTVPAVPEG AGAARPAAPP RPTSFSVLDI
51   LDPNKFNSRR RRCVLLGPVV PATCAPCAPA ACVAVPAASG RSPRAELERR
101  ALSAATGVAA AAGAEPTSAG DSYRADEAEA NGYSSGSGRS PTADSEDEAP
151  EDEDEEEAPE VQDAQGTEEP RGGSGGLGAR GSGCPGAAEV EASPVDDTAA
201  PGPRGNSPGA PGPPATATGA GSAGSTPQGA AVTTKPKRKR TGSDSKSGKP
251  RRARTAFTYE QLVALENKFK ATRYLSVCER LNLALSLSLT ETQVKIWFQN
301  RRTKWKKQNP GADTSAPTGG GGGPGPGAGP GAGLPGGLSP LSPSPPMGAP
351  LALHGPAGYP AHSPGGLVCA AQLPFLSSPA VLSPFVLGSQ TYGAPAFYAP
401  HL


References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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